Miyakogusa Predicted Gene

Lj1g3v4616550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JPR5_SOYBN 758 83.0 88.4 (tr|I1JPR5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G53190.1 668 72.8 81.0 | Symbols: | Pectin lyase-like superfamily protein | chr3:19714171-19717537 FORWARD LENGTH=483
Medicago Medtr7g102940.1 773 79.3 84.9 | pectate lyase-like protein | HC | chr7:41367341-41363424 | 20130731
Soybean Glyma03g34260.1 758 83.0 88.4  
LJGI gnl|LJGI|TC71294 1598 100.0 100.0 similar to UniRef100_Q9SCP2 Cluster: Probable pectate lyase 12 precursor; n=2; Arabidopsis thaliana|Rep: Probable pectate lyase 12 precursor - Arabidopsis thaliana (Mouse-ear cress), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4616550.1 length: 480 aa.
IPR002022 Pectate lyase/Amb allergen
method AccNumber shortName E-value location
HMMPfam PF00544 Pec_lyase_C 4.1e-61 153-338
HMMSmart SM00656 no description 1.4e-92 147-344
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 2e-104 72-418
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.2e-129 73-412
IPR018082 AmbAllergen
FPrintScan PR00807 AMBALLERGEN 1.2e-73 95-112
119-144
155-171
219-240
299-318
321-340
363-387
392-415
no_ID  
HMMPanther PTHR31683 FAMILY 1.4e-200 23-428
HMMPanther PTHR31683:SF0 SUBFAMILY 1.4e-200 23-428
Seg seg seg NA 104-109
184-198
Wolf-PSORT
Lj1g3v4616550.1	plas 7.5, golg_plas 5.5, vacu 3, golg 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4616550.1