Miyakogusa Predicted Gene

Lj1g3v4614460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L3X6_MEDTR 349 54.8 65.8 (tr|G7L3X6) RING finger and WD repeat domain-containing protein OS=Medicago truncatula GN=MTR_7g102280 PE=4 SV=1
TAIR_pep AT5G03450.1 258 43.9 59.3 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:858954-862238 REVERSE LENGTH=630
Medicago Medtr7g102280.1 349 54.8 65.8 | zinc finger, C3HC4 type (RING finger) protein | HC | chr7:41278137-41273041 | 20130731
Soybean Glyma03g34180.1 324 55.8 66.0  
LJGI gnl|LJGI|TC59187 1031 99.8 99.8 weakly similar to UniRef100_A7QJF6 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4614460.1 length: 414 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 8.4e-11 138-186
HMMSmart SM00184 Ring 0.0023 139-184
ProfileScan PS50089 ZF_RING_2 12.563 139-185
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.7e-13 135-197
no_ID  
Coil coil coiled-coil NA 24-66
HMMPanther PTHR16047 RFWD3 4.6e-65 20-395
HMMPanther PTHR16047:SF7 RFWD3 4.6e-65 20-395
Seg seg seg NA 26-65
superfamily SSF57850 RING/U-box 1.6e-15 134-200
Wolf-PSORT
Lj1g3v4614460.1	nucl 12, chlo 1, plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4614460.1