Miyakogusa Predicted Gene

Lj1g3v4604360.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KFU5_SOYBN 672 64.5 75.5 (tr|K7KFU5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G03450.1 422 43.9 59.2 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:858954-862238 REVERSE LENGTH=630
Medicago Medtr7g102280.1 609 58.1 71.1 | zinc finger, C3HC4 type (RING finger) protein | HC | chr7:41278137-41273041 | 20130731
Soybean Glyma03g34180.1 647 63.5 73.9  
LJGI gnl|LJGI|TC59187 850 99.8 99.8 weakly similar to UniRef100_A7QJF6 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4604360.1 length: 532 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1e-07 9-44
ProfileScan PS50089 ZF_RING_2 9.155 15-43
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.9e-08 2-55
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 1.5e-09 244-402
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 7.6e-13 237-528
no_ID  
HMMPanther PTHR16047 RFWD3 1.1e-110 1-532
HMMPanther PTHR16047:SF7 RFWD3 1.1e-110 1-532
superfamily SSF57850 RING/U-box 3.4e-09 1-58
Wolf-PSORT
Lj1g3v4604360.1	nucl 11, plas 1, vacu 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4604360.1