Miyakogusa Predicted Gene

Lj1g3v4591220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NAB2_SOYBN 1623 81.7 85.7 (tr|I1NAB2) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT2G36910.1 1489 81.4 87.7 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette subfamily B1 | chr2:15502162-15507050 FORWARD LENGTH=1286
Medicago Medtr7g102070.1 1650 83.3 87.3 | ABC transporter B family protein | HC | chr7:41180459-41173915 | 20130731
Soybean Glyma19g36820.1 1535 86.2 89.9  
LJGI gnl|LJGI|TC78233 1251 99.4 99.4 similar to UniRef100_Q2V606 Cluster: ABC transporter-like protein; n=1; Brassica rapa|Rep: ABC transporter-like protein - Brassica campestris (Field mustard), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4591220.1 length: 974 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 9.3e-37 107-378
750-973
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 4.9e-25 473-598
ProfileScan PS50893 ABC_TRANSPORTER_2 23.256 431-668
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 2.5e-15 458-643
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1.2e-38 67-412
721-973
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 570-584
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 33.065 109-396
747-974
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 9.1e-64 410-637
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 1.7e-34 105-412
734-972
Gene3D G3DSA:3.40.50.300 no description 1.4e-76 430-629
HMMPanther PTHR24221 FAMILY 0 97-973
HMMPanther PTHR24221:SF24 SUBFAMILY 0 97-973
Seg seg seg NA 161-172
392-403
421-433
663-681
Wolf-PSORT
Lj1g3v4591220.1	plas 10, E.R. 2, nucl 1, cyto 1, cyto_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4591220.1