Miyakogusa Predicted Gene
- Lj1g3v4590760.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A0PBZ4_LOTJA |
1415 |
95.5 |
97.2 |
(tr|A0PBZ4) Phenylalanine ammonia-lyase OS=Lotus japonicus GN=LjPAL5 PE=2 SV=1 |
| TAIR_pep |
AT2G37040.1 |
1231 |
81.8 |
91.5 |
| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725 |
| Medicago |
Medtr1g064090.1 |
1291 |
88.3 |
93.7 |
| phenylalanine ammonia-lyase-like protein | HC | chr1:28188012-28183314 | 20130731 |
| Soybean |
Glyma03g33880.1 |
1324 |
89.4 |
94.8 |
|
| LJGI |
gnl|LJGI|TC58358 |
3043 |
93.5 |
93.5 |
homologue to UniRef100_A0PBZ4 Cluster: Phenylalanine ammonia-lyase; n=1; Lotus japonicus|Rep: Phenylalanine ammonia-lyase - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4590760.3 |
length: 715 aa. |
| IPR001106 |
Aromatic amino acid lyase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMPfam |
PF00221 |
Lyase_aromatic |
9.1e-175 |
55-547 |
| IPR005922 |
Phenylalanine ammonia-lyase |
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Biological Process |
GO:0006559 |
L-phenylalanine catabolic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMTigr |
TIGR01226 |
phe_am_lyase: |
0 |
24-704 |
| IPR008948 |
L-Aspartase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF48557 |
L-aspartase-like |
2.2e-273 |
23-715 |
| IPR022313 |
Phenylalanine/histidine ammonia-lyases, active site |
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| PatternScan |
PS00488 |
PAL_HISTIDASE |
NA |
197-213 |
| IPR023144 |
Phenylalanine ammonia-lyase, shielding domain |
| Gene3D |
G3DSA:1.10.274.20 |
no description |
8.8e-58 |
534-649 |
| IPR024083 |
Fumarase/histidase, N-terminal |
| Gene3D |
G3DSA:1.10.275.10 |
no description |
2.9e-93 |
23-260 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.200.10 |
no description |
1.9e-139 |
650-704 |
| HMMPanther |
PTHR32364 |
FAMILY |
0 |
7-715 |
| HMMPanther |
PTHR32364:SF2 |
SUBFAMILY |
0 |
7-715 |
- Wolf-PSORT
Lj1g3v4590760.3 chlo 6, vacu 2, nucl 1.5, cysk_nucl 1.5, E.R._vacu 1.5, mito 1, plas 1, extr 1, E.R. 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4590760.3 |
|