Miyakogusa Predicted Gene
- Lj1g3v4590760.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A0PBZ3_LOTJA |
1427 |
98.4 |
98.4 |
(tr|A0PBZ3) Phenylalanine ammonia-lyase (Fragment) OS=Lotus japonicus GN=LjPAL4 PE=2 SV=1 |
| TAIR_pep |
AT2G37040.1 |
1209 |
81.1 |
90.4 |
| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725 |
| Medicago |
Medtr7g101395.1 |
1272 |
85.9 |
91.3 |
| phenylalanine ammonia-lyase-like protein | HC | chr7:40942826-40946044 | 20130731 |
| Soybean |
Glyma03g33880.1 |
1302 |
88.1 |
93.1 |
|
| LJGI |
gnl|LJGI|TC60002 |
4189 |
100.0 |
100.0 |
UniRef100_A0PBZ3 Cluster: Phenylalanine ammonia-lyase; n=1; Lotus japonicus|Rep: Phenylalanine ammonia-lyase - Lotus japonicus, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4590760.2 |
length: 717 aa. |
| IPR001106 |
Aromatic amino acid lyase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMPfam |
PF00221 |
Lyase_aromatic |
5.2e-174 |
57-550 |
| IPR005922 |
Phenylalanine ammonia-lyase |
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Biological Process |
GO:0006559 |
L-phenylalanine catabolic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMTigr |
TIGR01226 |
phe_am_lyase: |
0 |
26-706 |
| IPR008948 |
L-Aspartase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF48557 |
L-aspartase-like |
7.4e-272 |
25-717 |
| IPR022313 |
Phenylalanine/histidine ammonia-lyases, active site |
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| PatternScan |
PS00488 |
PAL_HISTIDASE |
NA |
199-215 |
| IPR023144 |
Phenylalanine ammonia-lyase, shielding domain |
| Gene3D |
G3DSA:1.10.274.20 |
no description |
1.4e-58 |
536-651 |
| IPR024083 |
Fumarase/histidase, N-terminal |
| Gene3D |
G3DSA:1.10.275.10 |
no description |
4.3e-93 |
25-262 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.200.10 |
no description |
6.2e-139 |
652-706 |
| HMMPanther |
PTHR32364 |
FAMILY |
0 |
9-717 |
| HMMPanther |
PTHR32364:SF2 |
SUBFAMILY |
0 |
9-717 |
| Seg |
seg |
seg |
NA |
667-677 |
- Wolf-PSORT
Lj1g3v4590760.2 chlo 5, extr 2, vacu 2, nucl 1.5, cysk_nucl 1.5, E.R._vacu 1.5, cyto 1, mito 1, E.R. 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4590760.2 |
|