Miyakogusa Predicted Gene

Lj1g3v4579590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5W677_PRUPE 921 66.7 75.6 (tr|M5W677) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002195mg PE=4 SV=1
TAIR_pep AT4G30080.1 699 54.6 67.6 | Symbols: ARF16 | auxin response factor 16 | chr4:14703369-14705564 REVERSE LENGTH=670
Medicago Medtr1g064430.1 817 61.9 71.7 | auxin response factor 1 | HC | chr1:28345468-28349210 | 20130731
Soybean Glyma10g06080.1 917 67.2 76.2  
LJGI gnl|LJGI|CB827147 704 99.7 99.7 weakly similar to UniRef100_A7NZK3 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4579590.1 length: 714 aa.
IPR003311 AUX/IAA protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02309 AUX_IAA 2.4e-07 625-707
IPR003340 B3 DNA binding domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 3.6e-21 140-241
HMMSmart SM01019 B3 4.8e-21 140-242
ProfileScan PS50863 B3 12.703 140-242
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 2.4e-32 310-392
IPR011525 Aux/IAA-ARF-dimerisation
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 20.552 629-707
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 5.3e-36 134-244
superfamily SSF101936 DNA-binding 2.8e-30 123-243
no_ID  
HMMPanther PTHR31384 FAMILY 2.5e-183 12-461
Seg seg seg NA 118-129
244-255
276-289
553-563
Wolf-PSORT
Lj1g3v4579590.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4579590.1