Miyakogusa Predicted Gene

Lj1g3v4579410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NA82_SOYBN 757 86.3 90.5 (tr|I1NA82) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G03160.1 597 74.0 84.5 | Symbols: ATP58IPK, P58IPK | homolog of mamallian P58IPK | chr5:750286-752671 FORWARD LENGTH=482
Medicago Medtr7g101070.1 722 84.4 90.9 | DnaJ heat shock amine-terminal domain protein | HC | chr7:40776292-40781290 | 20130731
Soybean Glyma19g36460.1 757 86.3 90.5  
LJGI gnl|LJGI|TC74213 1403 100.0 100.0 similar to UniRef100_A7PT19 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4579410.1 length: 486 aa.
IPR001623 DnaJ domain
method AccNumber shortName E-value location
FPrintScan PR00625 JDOMAIN 6.9e-22 369-387
387-402
405-425
425-444
Gene3D G3DSA:1.10.287.110 no description 4.7e-32 369-455
HMMPfam PF00226 DnaJ 5.2e-26 367-430
HMMSmart SM00271 DnaJ 4.1e-30 366-425
ProfileScan PS50076 DNAJ_2 22.305 367-433
superfamily SSF46565 Chaperone 5.6e-29 359-479
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.4e-18 45-131
132-248
249-368
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 29.303 46-346
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 1.8e-05 196-228
IPR018253 DnaJ domain, conserved site
PatternScan PS00636 DNAJ_1 NA 410-429
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 14 46-79
80-113
126-159
195-228
279-312
313-346
ProfileScan PS50005 TPR 7.611 46-79
80-113
126-159
195-228
241-274
279-312
313-346
no_ID  
Coil coil coiled-coil NA 238-259
403-424
HMMPanther PTHR24074 FAMILY 7.3e-68 49-486
HMMPfam PF13414 TPR_11 2.1e-06 45-111
248-309
Seg seg seg NA 195-209
439-481
superfamily SSF48452 TPR-like 4.4e-27 14-362
Wolf-PSORT
Lj1g3v4579410.1	cyto 4, chlo 2, plas 2, E.R. 2, pero 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4579410.1