Miyakogusa Predicted Gene

Lj1g3v4579300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q40221_LOTJA 1137 99.8 99.8 (tr|Q40221) Protein containing C-terminal RING-finger OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT2G37150.2 330 40.4 53.7 | Symbols: | RING/U-box superfamily protein | chr2:15603748-15605988 REVERSE LENGTH=546
Medicago Medtr7g100950.2 843 76.4 85.6 | zinc finger, C3HC4 type (RING finger) protein | HC | chr7:40711119-40708394 | 20130731
Soybean Glyma19g36400.2 915 79.8 87.5  
LJGI gnl|LJGI|TC57140 3255 99.9 99.9 UniRef100_Q40221 Cluster: Protein containing C-terminal RING-finger; n=1; Lotus japonicus|Rep: Protein containing C-terminal RING-finger - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4579300.1 length: 549 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.4e-13 495-539
HMMSmart SM00184 Ring 1.9e-07 496-537
ProfileScan PS50089 ZF_RING_2 12.534 496-538
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2e-16 491-541
no_ID  
HMMPanther PTHR22766 RING 6.3e-62 60-549
HMMPanther PTHR22766:SF28 SUBFAMILY 6.3e-62 60-549
superfamily SSF57850 RING/U-box 1.7e-17 481-544
Wolf-PSORT
Lj1g3v4579300.1	nucl 12, pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4579300.1