Miyakogusa Predicted Gene
- Lj1g3v4579230.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SQW9_LOTJA |
460 |
96.2 |
96.2 |
(tr|I3SQW9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G37110.1 |
303 |
72.6 |
83.2 |
| Symbols: | PLAC8 family protein | chr2:15592689-15593726 FORWARD LENGTH=242 |
| Medicago |
Medtr7g100870.1 |
347 |
84.3 |
88.8 |
| cell number regulator-like protein | HC | chr7:40651120-40655069 | 20130731 |
| Soybean |
Glyma19g36330.1 |
376 |
80.9 |
84.7 |
|
| LJGI |
gnl|LJGI|TC58463 |
1178 |
100.0 |
100.0 |
similar to UniRef100_Q6ULR9 Cluster: SAT5; n=5; Papilionoideae|Rep: SAT5 - Pisum sativum (Garden pea), partial (80%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4579230.1 |
length: 234 aa. |
| IPR006461 |
Uncharacterised protein family Cys-rich |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04749 |
PLAC8 |
5.5e-12 |
66-205 |
| HMMTigr |
TIGR01571 |
A_thal_Cys_rich: |
1.6e-11 |
81-206 |
| no_ID |
|
| HMMPanther |
PTHR15907 |
FAMILY |
7.9e-35 |
31-233 |
| HMMPanther |
PTHR15907:SF2 |
SUBFAMILY |
7.9e-35 |
31-233 |
| Seg |
seg |
seg |
NA |
20-27 |
- Wolf-PSORT
Lj1g3v4579230.1 nucl 7, chlo 2, cyto 2, plas 1, extr 1, vacu 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4579230.1 |
|