Miyakogusa Predicted Gene

Lj1g3v4579150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JPJ8_SOYBN 1034 76.1 83.6 (tr|I1JPJ8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G53360.1 747 60.4 76.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:19784502-19786808 FORWARD LENGTH=768
Medicago Medtr7g100810.1 989 78.5 88.5 | pentatricopeptide (PPR) repeat protein | HC | chr7:40624011-40626927 | 20130731
Soybean Glyma03g33580.1 1030 76.2 83.7  
LJGI gnl|LJGI|TC82284 99.6 81.1 81.1  
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4579150.1 length: 609 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.63 2-22
125-155
299-321
402-422
HMMPfam PF13041 PPR_2 5e-10 22-69
224-271
327-374
427-475
HMMTigr TIGR00756 PPR: 0.0014 24-57
125-159
227-260
329-362
430-464
465-498
ProfileScan PS51375 PPR 6.643 22-56
1-21
57-91
123-157
225-259
327-361
295-325
260-294
428-462
397-427
362-396
463-497
531-565
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.2e-10 541-583
no_ID  
HMMPanther PTHR24015 FAMILY 4e-263 1-590
HMMPanther PTHR24015:SF65 SUBFAMILY 4e-263 1-590
Wolf-PSORT
Lj1g3v4579150.1	cyto 7, nucl 4, chlo 1, mito 1, vacu 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4579150.1