Miyakogusa Predicted Gene

Lj1g3v4578920.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NA46_SOYBN 618 86.2 92.8 (tr|I1NA46) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G02830.1 482 65.1 78.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:644458-648421 REVERSE LENGTH=852
Medicago Medtr7g100550.1 596 82.5 90.8 | PPR containing plant-like protein | HC | chr7:40492537-40485311 | 20130731
Soybean Glyma19g36140.1 618 86.2 92.8  
LJGI gnl|LJGI|TC78615 383 100.0 100.0 similar to UniRef100_A7PSS3 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4578920.2 length: 354 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0019 67-97
246-276
HMMPfam PF12854 PPR_1 5.6e-06 22-52
HMMPfam PF13041 PPR_2 1.1e-13 100-147
278-324
HMMTigr TIGR00756 PPR: 5.3e-07 29-54
67-100
102-136
138-166
246-280
282-315
ProfileScan PS51375 PPR 7.717 26-56
100-134
65-99
135-169
244-278
211-243
279-313
314-351
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00037 273-314
no_ID  
HMMPanther PTHR24015 FAMILY 2.4e-75 3-350
HMMPanther PTHR24015:SF0 SUBFAMILY 2.4e-75 3-350
Wolf-PSORT
Lj1g3v4578920.2	chlo 12, nucl 1, plas 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4578920.2