Miyakogusa Predicted Gene

Lj1g3v4578800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7ML33_SOYBN 1480 61.8 73.8 (tr|K7ML33) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G42170.1 839 56.8 72.5 | Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696
Medicago Medtr4g036325.1 63.5 34.7 58.2 | hypothetical protein | LC | chr4:13081348-13082899 | 20130731
Soybean Glyma07g03280.1 668 50.4 67.4  
LJGI gnl|LJGI|GO006510 1277 99.5 99.5 similar to UniRef100_A7PF89 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4578800.1 length: 1206 aa.
IPR003656 Zinc finger, BED-type predicted
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02892 zf-BED 8e-09 568-619
HMMSmart SM00614 BED 2.6e-14 565-621
ProfileScan PS50808 ZF_BED 10.509 565-625
IPR008906 HAT dimerisation
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF05699 Dimer_Tnp_hAT 1.7e-29 1115-1197
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 6.4e-67 727-1202
IPR025525 Domain of unknown function DUF4413
HMMPfam PF14372 DUF4413 6.2e-29 965-1063
no_ID  
HMMPanther PTHR10775 UNCHARACTERIZED 7.8e-124 483-1199
HMMPanther PTHR10775:SF11 SUBFAMILY 7.8e-124 483-1199
Seg seg seg NA 429-440
1088-1099
superfamily SSF57667 C2H2 4.3e-09 568-628
Wolf-PSORT
Lj1g3v4578800.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4578800.1