Miyakogusa Predicted Gene

Lj1g3v4554710.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SBM4_LOTJA 335 90.3 90.3 (tr|I3SBM4) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G53610.3 316 83.8 88.6 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Medicago Medtr1g068730.1 329 87.6 89.7 | RAB GTPase-like protein A5B | HC | chr1:29344444-29337634 | 20130731
Soybean Glyma02g10450.1 327 86.5 89.7  
LJGI gnl|LJGI|TC60324 1296 100.0 100.0 homologue to UniRef100_Q41024 Cluster: Small GTP-binding protein; n=1; Pisum sativum|Rep: Small GTP-binding protein - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4554710.1 length: 216 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1.7e-46 16-37
39-55
57-79
119-132
155-177
HMMPfam PF00071 Ras 2e-66 17-178
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 1.9e-07 21-215
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 4e-14 18-180
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 7.6e-107 16-180
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 3.1e-32 14-170
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 4.8e-36 17-180
IPR024156 Small GTPase superfamily, ARF type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00177 ARF-like 0.0038 1-181
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.2e-70 11-214
no_ID  
Gene3D G3DSA:3.40.50.300 no description 8.4e-78 8-214
HMMPanther PTHR24073 FAMILY 2.2e-163 1-216
HMMPanther PTHR24073:SF56 SUBFAMILY 2.2e-163 1-216
ProfileScan PS51419 RAB 38.587 11-214
Seg seg seg NA 2-14
35-52
200-216
Wolf-PSORT
Lj1g3v4554710.1	chlo 5, cyto 5, mito 2, nucl 1, extr 1, cyto_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4554710.1