Miyakogusa Predicted Gene

Lj1g3v4552380.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6T7Y7_SOYBN 216 50.2 60.0 (tr|C6T7Y7) Uncharacterized protein OS=Glycine max PE=2 SV=1

TAIR_pep AT2G37480.1 56.2 64.1 74.4 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr2:15738645-15739579 FORWARD LENGTH=194

Medicago Medtr7g099950.1 202 49.4 60.0 | hypothetical protein | HC | chr7:40175410-40173168 | 20130731

Soybean Glyma03g32970.1 216 50.2 60.0

LJGI gnl|LJGI|TC57805 674 100.0 100.0 weakly similar to UniRef100_Q9ZUR9 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (74%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4552380.1 length: 252 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 80-91
155-193

Wolf-PSORT

Lj1g3v4552380.1 nucl 11.5, cyto_nucl 7, cyto 1.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4552380.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6T7Y7_SOYBN	216	50.2	60.0	(tr\|C6T7Y7) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep	AT2G37480.1	56.2	64.1	74.4	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53670.2); Has 186 Blast hits to 186 proteins in 35 species: Archae - 0; Bacteria - 2; Metazoa - 14; Fungi - 7; Plants - 154; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). \| chr2:15738645-15739579 FORWARD LENGTH=194
Medicago	Medtr7g099950.1	202	49.4	60.0	\| hypothetical protein \| HC \| chr7:40175410-40173168 \| 20130731
Soybean	Glyma03g32970.1	216	50.2	60.0
LJGI	gnl\|LJGI\|TC57805	674	100.0	100.0	weakly similar to UniRef100_Q9ZUR9 Cluster: Expressed protein; n=1; Arabidopsis thaliana\|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), partial (74%)

no_ID
Lj1g3v4552380.1				length: 252 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	80-91 155-193