Miyakogusa Predicted Gene

Lj1g3v4551350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L0K9_MEDTR 1206 66.9 70.7 (tr|G7L0K9) Eukaryotic translation initiation factor 3 subunit A OS=Medicago truncatula GN=MTR_7g099920 PE=3 SV=1
TAIR_pep AT4G11420.1 1004 63.3 73.3 | Symbols: EIF3A, ATEIF3A-1, EIF3A-1, ATTIF3A1, TIF3A1 | eukaryotic translation initiation factor 3A | chr4:6947834-6952053 REVERSE LENGTH=987
Medicago Medtr7g099920.1 1206 66.9 70.7 | eukaryotic translation initiation factor 3a | HC | chr7:40165155-40158125 | 20130731
Soybean Glyma03g32950.2 1175 74.8 79.2  
LJGI gnl|LJGI|TC63076 1229 100.0 100.0 homologue to UniRef100_A7PRW8 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4551350.1 length: 960 aa.
IPR000717 Proteasome component (PCI) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01399 PCI 1.7e-18 373-508
HMMSmart SM00088 motif 1.3e-06 441-532
IPR027512 Eukaryotic translation initiation factor 3 subunit A
Cellular Component GO:0005852 eukaryotic translation initiation factor 3 complex    
HAMAP MF_03000 eIF3a 27.680 1-888
HMMPanther PTHR14005:SF0 SUBFAMILY 0 1-937
no_ID  
Coil coil coiled-coil NA 93-121
561-603
615-650
667-698
796-857
HMMPanther PTHR14005 EUKARYOTIC 0 1-937
Seg seg seg NA 109-122
318-330
367-383
572-598
617-640
658-676
709-725
764-776
800-835
838-859
869-890
904-915
Wolf-PSORT
Lj1g3v4551350.1	cyto 11, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4551350.1