Miyakogusa Predicted Gene

Lj1g3v4549030.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL E9RGY2_SOPFL 829 93.5 93.7 (tr|E9RGY2) Regulatory particle triple-A ATPase 2 OS=Sophora flavescens GN=RPT2 PE=2 SV=1
TAIR_pep AT4G29040.1 801 90.6 92.4 | Symbols: RPT2a | regulatory particle AAA-ATPase 2A | chr4:14312369-14314386 FORWARD LENGTH=443
Medicago Medtr1g069105.1 813 91.5 92.8 | regulatory particle triple-A ATPase | HC | chr1:29665110-29669968 | 20130731
Soybean Glyma03g32800.1 830 93.7 93.7  
LJGI gnl|LJGI|TC60370 2650 99.9 99.9 homologue to UniRef100_Q38JH4 Cluster: 26S proteasome subunit 4-like; n=1; Solanum tuberosum|Rep: 26S proteasome subunit 4-like - Solanum tuberosum (Potato), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4549030.1 length: 446 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.6e-20 224-363
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 2.3e-40 228-361
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 331-349
IPR005937 26S proteasome subunit P45
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0016787 hydrolase activity    
Biological Process GO:0030163 protein catabolic process    
HMMTigr TIGR01242 26Sp45: 2.2e-140 81-433
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-69 180-433
no_ID  
Gene3D G3DSA:1.10.8.60 no description 1e-22 371-433
Gene3D G3DSA:3.40.50.300 no description 7.2e-60 182-370
HMMPanther PTHR23073 26S 0 1-446
HMMPanther PTHR23073:SF9 26S 0 1-446
Seg seg seg NA 25-37
423-437
Wolf-PSORT
Lj1g3v4549030.1	cyto 10, chlo 1, nucl 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4549030.1