Miyakogusa Predicted Gene

Lj1g3v4518310.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JP73_SOYBN 583 67.3 73.8 (tr|I1JP73) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G43960.1 321 47.6 59.2 | Symbols: | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain | chr5:17689154-17691653 REVERSE LENGTH=450
Medicago Medtr7g098440.1 533 62.6 69.6 | ras GTPase-activating binding-like protein | HC | chr7:39405253-39409647 | 20130731
Soybean Glyma03g32420.1 509 59.9 66.8  
LJGI gnl|LJGI|TC81877 1134 100.0 100.0 similar to UniRef100_A7NXI7 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4518310.1 length: 462 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 2.2e-12 323-395
ProfileScan PS50102 RRM 12.765 322-399
IPR002075 Nuclear transport factor 2
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006810 transport    
HMMPfam PF02136 NTF2 1.7e-22 14-127
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 1e-13 314-415
IPR018222 Nuclear transport factor 2, Eukaryote
ProfileScan PS50177 NTF2_DOMAIN 25.543 14-128
no_ID  
Gene3D G3DSA:3.10.450.50 no description 4.7e-28 10-131
HMMPanther PTHR10693 RAS 6.9e-104 3-462
HMMPanther PTHR10693:SF8 NUCLEAR 6.9e-104 3-462
HMMPfam PF14259 RRM_6 1.6e-10 324-393
Seg seg seg NA 201-210
283-296
302-320
406-417
424-436
superfamily SSF54427 NTF2-like 1.2e-30 10-133
superfamily SSF54928 RNA-binding 2.9e-19 320-431
Wolf-PSORT
Lj1g3v4518310.1	chlo 8, nucl 4, chlo_mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4518310.1