Miyakogusa Predicted Gene

Lj1g3v4515870.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5W0M4_PRUPE 924 59.6 71.5 (tr|M5W0M4) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa019080mg PE=4 SV=1
TAIR_pep AT1G35710.1 441 37.7 51.1 | Symbols: | Protein kinase family protein with leucine-rich repeat domain | chr1:13220940-13224386 FORWARD LENGTH=1120
Medicago Medtr7g096980.1 586 45.6 60.0 | LRR receptor-like kinase family protein | HC | chr7:38938743-38934710 | 20130731
Soybean Glyma18g42730.1 478 39.7 53.9  
LJGI gnl|LJGI|DC593071 1043 100.0 100.0 weakly similar to UniRef100_A7PH70 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4515870.1 length: 886 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.52 116-138
236-258
405-427
477-499
ProfileScan PS51450 LRR 5.725 116-138
140-163
164-185
188-209
211-232
236-258
260-282
284-306
405-427
429-451
477-499
453-475
501-523
596-618
643-665
692-714
740-764
765-788
789-811
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 5.5 138-161
162-185
186-209
234-257
258-282
306-330
354-378
403-427
451-474
475-498
499-522
639-665
690-714
763-787
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 0.00015 24-63
no_ID  
FPrintScan PR00019 LEURICHRPT 2.5e-06 644-657
763-776
Gene3D G3DSA:3.80.10.10 no description 1.1e-57 24-228
231-373
374-571
572-828
HMMPanther PTHR24420 FAMILY 1.5e-152 241-866
HMMPanther PTHR24420:SF68 SUBFAMILY 1.5e-152 241-866
HMMPfam PF13855 LRR_8 6.2e-08 164-220
643-703
745-800
HMMSmart SM00365 Leucine-rich 3.1e+02 114-140
159-180
234-260
403-429
475-504
690-705
763-786
ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-16
Seg seg seg NA 157-170
475-489
662-680
851-866
superfamily SSF52047 RNI-like 4.8e-67 70-393
superfamily SSF52058 L 1e-48 371-641
594-828
Wolf-PSORT
Lj1g3v4515870.1	plas 12, vacu 1, E.R. 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4515870.1