Miyakogusa Predicted Gene

Lj1g3v4495350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N9R3_SOYBN 550 73.8 82.3 (tr|I1N9R3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G06210.1 354 59.2 72.9 | Symbols: | ENTH/VHS/GAT family protein | chr1:1897567-1898986 FORWARD LENGTH=383
Medicago Medtr7g097010.1 501 73.1 81.3 | ENTH/VHS/GAT family protein | HC | chr7:38958252-38953937 | 20130731
Soybean Glyma19g34790.1 550 73.8 82.3  
LJGI gnl|LJGI|TC63257 2121 100.0 100.0 similar to UniRef100_A7Q1S7 Cluster: Chromosome chr7 scaffold_44, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_44, whole genome shotgun sequence - Vitis vinifera (Grape), partial (80%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4495350.1 length: 403 aa.
IPR002014 VHS
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF00790 VHS 3.2e-22 39-146
ProfileScan PS50179 VHS 29.320 45-172
IPR004152 GAT
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006886 intracellular protein transport    
HMMPfam PF03127 GAT 9.8e-11 225-314
ProfileScan PS50909 GAT 13.557 223-310
IPR008942 ENTH/VHS
Gene3D G3DSA:1.25.40.90 no description 1.4e-30 35-168
superfamily SSF48464 ENTH/VHS 4e-30 37-173
IPR018205 VHS subgroup
HMMSmart SM00288 Domain 8.5e-20 38-168
no_ID  
Gene3D G3DSA:1.20.58.160 no description 3.9e-15 222-311
HMMPanther PTHR13856 VHS 2.5e-64 28-351
HMMPanther PTHR13856:SF27 TARGET 2.5e-64 28-351
Seg seg seg NA 237-249
superfamily SSF89009 GAT-like 3.8e-18 181-312
Wolf-PSORT
Lj1g3v4495350.1	cyto 10, nucl 2, mito 1, plas 1, cysk_nucl 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4495350.1 Not targeted -40.326 -2.660 -13.577 54.11% -24.089