Miyakogusa Predicted Gene
- Lj1g3v4483790.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S1M0_LOTJA |
277 |
91.1 |
91.1 |
(tr|I3S1M0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G31200.1 |
221 |
69.2 |
80.8 |
| Symbols: ADF6, ATADF6 | actin depolymerizing factor 6 | chr2:13294171-13294948 FORWARD LENGTH=146 |
| Medicago |
Medtr7g096890.1 |
261 |
84.9 |
88.4 |
| cofilin/actin-depolymerizing factor-like protein | HC | chr7:38902490-38895792 | 20130731 |
| Soybean |
Glyma03g31960.1 |
266 |
85.6 |
89.0 |
|
| LJGI |
gnl|LJGI|TC62885 |
874 |
100.0 |
100.0 |
homologue to UniRef100_Q8SAG3 Cluster: Actin-depolymerizing factor; n=1; Vitis vinifera|Rep: Actin-depolymerizing factor - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4483790.1 |
length: 146 aa. |
| IPR002108 |
Actin-binding, cofilin/tropomyosin type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003779 |
actin binding |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| HMMPfam |
PF00241 |
Cofilin_ADF |
2.9e-42 |
20-145 |
| HMMSmart |
SM00102 |
Actin |
1e-58 |
19-146 |
| ProfileScan |
PS51263 |
ADF_H |
39.904 |
14-146 |
| IPR017904 |
ADF/Cofilin/Destrin |
| Cellular Component |
GO:0015629 |
actin cytoskeleton |
|
|
| Biological Process |
GO:0030042 |
actin filament depolymerization |
|
|
| HMMPanther |
PTHR11913 |
COFILIN-RELATED |
1.6e-76 |
9-145 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.20.10 |
no description |
5.8e-46 |
11-144 |
| Seg |
seg |
seg |
NA |
40-52 |
| superfamily |
SSF55753 |
Actin |
5.4e-46 |
11-146 |
- Wolf-PSORT
Lj1g3v4483790.1 mito 6, chlo 5, nucl 1, cyto 1, pero 1, cyto_nucl 1, cyto_pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4483790.1 |
|