Miyakogusa Predicted Gene

Lj1g3v4467770.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KRB9_SOYBN 864 84.1 88.1 (tr|K7KRB9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G51050.1 705 73.4 82.0 | Symbols: | Mitochondrial substrate carrier family protein | chr5:20753381-20755714 FORWARD LENGTH=487
Medicago Medtr8g096050.1 852 82.6 86.8 | substrate carrier family protein | HC | chr8:40066038-40061537 | 20130731
Soybean Glyma08g00960.1 853 83.9 88.3  
LJGI gnl|LJGI|TC77394 1029 100.0 100.0 similar to UniRef100_A7PHT1 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4467770.1 length: 503 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13405 EF_hand_4 0.00053 90-114
HMMSmart SM00054 EF-hand, 0.94 52-80
88-116
119-147
155-183
ProfileScan PS50222 EF_HAND_2 13.174 48-83
84-119
120-150
151-186
IPR002067 Mitochondrial carrier protein
Biological Process GO:0055085 transmembrane transport    
FPrintScan PR00926 MITOCARRIER 3.3e-29 223-236
236-250
276-296
327-345
372-390
420-442
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 3.4e-30 47-187
HMMPfam PF13499 EF_hand_5 2.1e-08 120-179
IPR018108 Mitochondrial substrate/solute carrier
HMMPfam PF00153 Mito_carr 3.6e-25 221-303
312-400
411-500
ProfileScan PS50920 SOLCAR 24.251 218-301
312-399
411-499
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 97-109
164-176
IPR023395 Mitochondrial carrier domain
Gene3D G3DSA:1.50.40.10 no description 5.6e-91 219-498
superfamily SSF103506 Mitochondrial 1.8e-74 215-496
no_ID  
HMMPanther PTHR24089 FAMILY 2.5e-148 202-503
HMMPanther PTHR24089:SF57 SUBFAMILY 2.5e-148 202-503
Seg seg seg NA 14-25
269-280
320-332
superfamily SSF47473 EF-hand 7.1e-41 32-223
Wolf-PSORT
Lj1g3v4467770.1	cyto 8, cysk 3, mito 1, vacu 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4467770.1