Miyakogusa Predicted Gene
- Lj1g3v4453640.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7KFC6_SOYBN |
247 |
73.7 |
81.9 |
(tr|K7KFC6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT5G64560.1 |
214 |
66.1 |
75.2 |
| Symbols: MGT9, MRS2-2, ATMGT9 | magnesium transporter 9 | chr5:25807025-25809395 REVERSE LENGTH=394 |
Medicago |
Medtr7g096170.1 |
250 |
74.1 |
80.1 |
| magnesium transporter MRS2-like protein | HC | chr7:38570671-38574513 | 20130731 |
Soybean |
Glyma19g34430.1 |
247 |
73.9 |
82.4 |
|
LJGI |
gnl|LJGI|TC78069 |
975 |
99.0 |
99.0 |
similar to UniRef100_A7NX02 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4453640.2 |
length: 170 aa. |
IPR002523 |
Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0016020 |
membrane |
|
|
Biological Process |
GO:0030001 |
metal ion transport |
|
|
Molecular Function |
GO:0046873 |
metal ion transmembrane transporter activity |
|
|
Biological Process |
GO:0055085 |
transmembrane transport |
|
|
HMMPfam |
PF01544 |
CorA |
2.7e-08 |
58-156 |
IPR026573 |
Magnesium transporter MRS2/LPE10 |
Molecular Function |
GO:0015095 |
magnesium ion transmembrane transporter activity |
|
|
Biological Process |
GO:0015693 |
magnesium ion transport |
|
|
HMMPanther |
PTHR13890 |
RNA |
2.6e-53 |
1-169 |
no_ID |
|
Gene3D |
G3DSA:1.20.58.340 |
no description |
1.5e-05 |
98-166 |
HMMPanther |
PTHR13890:SF0 |
SUBFAMILY |
2.6e-53 |
1-169 |
Seg |
seg |
seg |
NA |
13-20 |
- Wolf-PSORT
Lj1g3v4453640.2 nucl 5.5, cyto_nucl 4, chlo 2, mito 2, plas 2, chlo_mito 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v4453640.2 |
Not targeted |
-51.640 |
0 |
-5.373 |
77.31% |
-46.268
|