Miyakogusa Predicted Gene
- Lj1g3v4450530.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N9M3_SOYBN |
310 |
93.0 |
96.8 |
(tr|I1N9M3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G03030.1 |
248 |
78.2 |
91.0 |
| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:701621-703568 FORWARD LENGTH=301 |
| Medicago |
Medtr7g096100.1 |
311 |
91.1 |
98.1 |
| phosphoribulokinase/uridine kinase family protein | HC | chr7:38538783-38534861 | 20130731 |
| Soybean |
Glyma19g34390.1 |
310 |
93.0 |
96.8 |
|
| LJGI |
gnl|LJGI|TC75206 |
658 |
99.7 |
99.7 |
similar to UniRef100_A7PUL3 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4450530.1 |
length: 157 aa. |
| IPR006083 |
Phosphoribulokinase/uridine kinase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| Biological Process |
GO:0008152 |
metabolic process |
|
|
| Molecular Function |
GO:0016301 |
kinase activity |
|
|
| HMMPfam |
PF00485 |
PRK |
7.9e-05 |
26-155 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
7.7e-22 |
1-156 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
5.6e-43 |
1-153 |
| HMMPanther |
PTHR10285 |
URIDINE |
3.5e-85 |
1-156 |
| HMMPanther |
PTHR10285:SF40 |
SUBFAMILY |
3.5e-85 |
1-156 |
- Wolf-PSORT
Lj1g3v4450530.1 cyto 8, extr 2, nucl 1, E.R. 1, cysk 1, golg 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4450530.1 |
|