Miyakogusa Predicted Gene
- Lj1g3v4450290.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L889_SOYBN |
401 |
82.3 |
92.7 |
(tr|I1L889) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G38840.1 |
370 |
74.6 |
89.7 |
| Symbols: | Guanylate-binding family protein | chr2:16227329-16232115 FORWARD LENGTH=602 |
| Medicago |
Medtr7g096020.1 |
410 |
84.5 |
93.5 |
| guanylate-binding family protein | HC | chr7:38488910-38496293 | 20130731 |
| Soybean |
Glyma10g03660.1 |
382 |
77.2 |
86.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4450290.2 |
length: 234 aa. |
| IPR003191 |
Guanylate-binding protein, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003924 |
GTPase activity |
|
|
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF02841 |
GBP_C |
3.9e-08 |
118-233 |
| superfamily |
SSF48340 |
Interferon-induced |
3.6e-24 |
117-234 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
202-223 |
| Gene3D |
G3DSA:1.20.1000.10 |
no description |
1.5e-13 |
118-233 |
| Gene3D |
G3DSA:3.40.50.300 |
no description |
4.8e-24 |
6-117 |
| HMMPanther |
PTHR10751 |
GUANYLATE |
4.7e-40 |
10-233 |
- Wolf-PSORT
Lj1g3v4450290.2 nucl 9, cyto 3, mito 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4450290.2 |
Targeted |
5.099 |
-1.589 |
-0.644 |
0.19% |
7.332
|