Miyakogusa Predicted Gene
- Lj1g3v4450290.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1L889_SOYBN |
642 |
82.3 |
92.3 |
(tr|I1L889) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G38840.1 |
587 |
72.7 |
88.4 |
| Symbols: | Guanylate-binding family protein | chr2:16227329-16232115 FORWARD LENGTH=602 |
| Medicago |
Medtr1g070940.1 |
595 |
76.5 |
87.6 |
| guanylate-binding family protein | HC | chr1:31412653-31405961 | 20130731 |
| Soybean |
Glyma10g03660.1 |
641 |
82.3 |
92.3 |
|
| LJGI |
gnl|LJGI|TC75786 |
301 |
96.6 |
96.6 |
weakly similar to UniRef100_A7PUJ8 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4450290.1 |
length: 362 aa. |
| IPR003191 |
Guanylate-binding protein, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003924 |
GTPase activity |
|
|
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF02841 |
GBP_C |
9.1e-11 |
54-185 |
| superfamily |
SSF48340 |
Interferon-induced |
2.2e-39 |
53-275 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
138-159 |
| Gene3D |
G3DSA:1.20.1000.10 |
no description |
4e-15 |
54-217 |
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.4e-09 |
1-53 |
| HMMPanther |
PTHR10751 |
GUANYLATE |
1.1e-33 |
1-185 |
- Wolf-PSORT
Lj1g3v4450290.1 plas 8.5, cyto_plas 5.5, cyto 1.5, nucl 1, vacu 1, E.R. 1, golg 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4450290.1 |
|