Miyakogusa Predicted Gene

Lj1g3v4431080.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JNT8_SOYBN 925 82.5 87.1 (tr|I1JNT8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G31530.1 778 74.2 85.2 | Symbols: EMB2289, SCY2 | SecY protein transport family protein | chr2:13427060-13430308 FORWARD LENGTH=575
Medicago Medtr7g094800.1 896 80.6 85.2 | preprotein translocase subunit SecY | HC | chr7:37833621-37826563 | 20130731
Soybean Glyma03g30970.1 925 82.5 87.1  
LJGI gnl|LJGI|BW618823 670 100.0 100.0 similar to UniRef100_A7PU98 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4431080.1 length: 563 aa.
IPR002208 SecY/SEC61-alpha family
method AccNumber shortName E-value location
Biological Process GO:0015031 protein transport    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10906 SECY/SEC61-ALPHA 3.2e-162 114-561
HMMPfam PF00344 SecY 2.3e-84 195-541
IPR023201 SecY subunit domain
Gene3D G3DSA:1.10.3370.10 no description 5.7e-100 131-561
superfamily SSF103491 Preprotein 1.1e-78 118-550
no_ID  
FPrintScan PR00303 SECYTRNLCASE 1.4e-38 143-161
194-214
235-258
270-295
296-319
394-413
439-461
527-545
HMMPanther PTHR10906:SF2 PROTEIN 3.2e-162 114-561
Seg seg seg NA 501-513
Wolf-PSORT
Lj1g3v4431080.1	plas 8, chlo 4, nucl_plas 4, golg_plas 4, cysk_plas 4, E.R._plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4431080.1