Miyakogusa Predicted Gene

Lj1g3v4407610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FL19_MEDTR 556 84.7 91.4 (tr|B7FL19) Exosome complex exonuclease RRP4 OS=Medicago truncatula GN=MTR_4g121550 PE=2 SV=1
TAIR_pep AT1G03360.1 424 65.3 79.0 | Symbols: ATRRP4, RRP4 | ribosomal RNA processing 4 | chr1:824653-826179 FORWARD LENGTH=322
Medicago Medtr4g121550.1 556 84.7 91.4 | ribosomal RNA processing protein | HC | chr4:50237475-50242384 | 20130731
Soybean Glyma19g33520.1 544 84.3 90.1  
LJGI gnl|LJGI|TC65176 1951 100.0 100.0 similar to UniRef100_A7PU41 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4407610.1 length: 327 aa.
IPR026699 Exosome complex RNA-binding protein 1/RRP40/RRP4
method AccNumber shortName E-value location
Cellular Component GO:0000178 exosome (RNase complex)    
Molecular Function GO:0003723 RNA binding    
HMMPanther PTHR21321 PNAS-3 2.9e-106 12-327
no_ID  
Coil coil coiled-coil NA 9-30
HMMPanther PTHR21321:SF2 RRP4 2.9e-106 12-327
Seg seg seg NA 289-300
314-327
Wolf-PSORT
Lj1g3v4407610.1	mito 4, chlo 3, nucl 2, vacu 2, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4407610.1