Miyakogusa Predicted Gene
- Lj1g3v4405510.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I3T7H6_LOTJA |
138 |
76.7 |
81.4 |
(tr|I3T7H6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
TAIR_pep |
AT2G48020.1 |
123 |
66.3 |
75.6 |
| Symbols: | Major facilitator superfamily protein | chr2:19644441-19647007 FORWARD LENGTH=463 |
Medicago |
Medtr7g094110.1 |
139 |
76.7 |
81.4 |
| sugar porter (SP) family MFS transporter | HC | chr7:37461660-37465962 | 20130731 |
Soybean |
Glyma19g33480.1 |
132 |
74.4 |
77.9 |
|
LJGI |
gnl|LJGI|TC76194 |
387 |
93.3 |
93.3 |
similar to UniRef100_A7PU29 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4405510.1 |
length: 87 aa. |
IPR005828 |
General substrate transporter |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0016021 |
integral to membrane |
|
|
Molecular Function |
GO:0022857 |
transmembrane transporter activity |
|
|
Biological Process |
GO:0055085 |
transmembrane transport |
|
|
HMMPfam |
PF00083 |
Sugar_tr |
2e-18 |
2-83 |
IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
superfamily |
SSF103473 |
MFS |
4.7e-12 |
1-82 |
IPR020846 |
Major facilitator superfamily domain |
ProfileScan |
PS50850 |
MFS |
15.525 |
1-74 |
no_ID |
|
Gene3D |
G3DSA:1.20.1250.20 |
no description |
3.8e-08 |
4-80 |
HMMPanther |
PTHR24063 |
FAMILY |
1.6e-50 |
1-87 |
HMMPanther |
PTHR24063:SF73 |
PUTATIVE |
1.6e-50 |
1-87 |
Seg |
seg |
seg |
NA |
56-70 |
- Wolf-PSORT
Lj1g3v4405510.1 nucl 5, extr 4, plas 2, cyto 1, mito 1, vacu 1, golg_plas 1, cysk_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v4405510.1 |
|