Miyakogusa Predicted Gene
- Lj1g3v4405470.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KF52_SOYBN |
130 |
69.9 |
74.2 |
(tr|K7KF52) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT2G48020.1 |
104 |
52.7 |
67.7 |
| Symbols: | Major facilitator superfamily protein | chr2:19644441-19647007 FORWARD LENGTH=463 |
| Medicago |
Medtr7g094110.1 |
129 |
68.8 |
77.4 |
| sugar porter (SP) family MFS transporter | HC | chr7:37461660-37465962 | 20130731 |
| Soybean |
Glyma19g33480.1 |
130 |
69.9 |
74.2 |
|
| LJGI |
gnl|LJGI|TC76194 |
317 |
95.8 |
95.8 |
similar to UniRef100_A7PU29 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4405470.1 |
length: 93 aa. |
| IPR005828 |
General substrate transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0022857 |
transmembrane transporter activity |
|
|
| Biological Process |
GO:0055085 |
transmembrane transport |
|
|
| HMMPfam |
PF00083 |
Sugar_tr |
1.1e-15 |
2-82 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
0.00014 |
14-75 |
| HMMPanther |
PTHR24063 |
FAMILY |
7.6e-28 |
1-93 |
| HMMPanther |
PTHR24063:SF73 |
PUTATIVE |
7.6e-28 |
1-93 |
| Seg |
seg |
seg |
NA |
57-68 |
- Wolf-PSORT
Lj1g3v4405470.1 extr 7, chlo 4, cyto 1, mito 1, plas 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4405470.1 |
|