Miyakogusa Predicted Gene

Lj1g3v4404380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JNP9_SOYBN 1303 69.0 75.1 (tr|I1JNP9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G03380.1 789 49.2 60.4 | Symbols: ATATG18G, ATG18G | homolog of yeast autophagy 18 (ATG18) G | chr1:836155-840362 FORWARD LENGTH=959
Medicago Medtr1g089110.2 1187 63.2 72.0 | breast carcinoma amplified sequence 3 protein | HC | chr1:40108647-40103733 | 20130731
Soybean Glyma03g30510.1 1303 69.0 75.1  
LJGI gnl|LJGI|TC75261 839 99.8 99.8 similar to UniRef100_A7PU26 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4404380.1 length: 983 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 6.5e-05 359-392
HMMSmart SM00320 WD40 3.7 182-217
355-395
413-456
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 8.2e-12 345-456
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 2.6e-13 168-460
IPR022175 Breast carcinoma amplified sequence 3
HMMPfam PF12490 BCAS3 6.5e-65 502-746
no_ID  
HMMPanther PTHR13268 BREAST 6e-185 1-755
Seg seg seg NA 2-10
25-52
138-156
278-290
483-511
797-809
963-975
Wolf-PSORT
Lj1g3v4404380.1	chlo 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4404380.1