Miyakogusa Predicted Gene

Lj1g3v4317470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6T7I3_SOYBN 532 79.2 84.8 (tr|C6T7I3) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT3G15010.2 182 40.2 59.8 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:5052844-5054058 FORWARD LENGTH=404
Medicago Medtr4g088010.1 202 40.6 60.5 | heterogeneous nuclear ribonucleoprotein | HC | chr4:34502474-34498575 | 20130731
Soybean Glyma03g29930.1 532 79.2 84.8  
LJGI gnl|LJGI|BP036103 295 100.0 100.0 similar to UniRef100_Q6IEI7 Cluster: RTN6; n=1; Cyprinus carpio|Rep: RTN6 - Cyprinus carpio (Common carp), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4317470.1 length: 337 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 2.7e-16 66-132
157-225
HMMSmart SM00360 RNA 6.5e-22 65-137
156-228
ProfileScan PS50102 RRM 16.313 64-155
155-232
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 7.7e-22 57-139
150-231
no_ID  
HMMPanther PTHR24011 FAMILY 5.4e-52 1-236
HMMPanther PTHR24011:SF91 SUBFAMILY 5.4e-52 1-236
superfamily SSF54928 RNA-binding 2.2e-20 145-251
64-139
Wolf-PSORT
Lj1g3v4317470.1	nucl 7, cyto 3, chlo 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4317470.1