Miyakogusa Predicted Gene

Lj1g3v4288730.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9SL66_RICCO 445 79.0 83.3 (tr|B9SL66) TRANSPARENT TESTA 1 protein, putative OS=Ricinus communis GN=RCOM_0090910 PE=4 SV=1
TAIR_pep AT3G57670.1 401 80.4 83.9 | Symbols: NTT, WIP2 | C2H2-type zinc finger family protein | chr3:21370936-21373121 FORWARD LENGTH=383
Medicago Medtr1g093095.1 289 74.4 86.6 | C2H2-type zinc finger protein | HC | chr1:41939075-41940250 | 20130731
Soybean Glyma03g29610.1 443 76.7 79.9  
LJGI gnl|LJGI|TC80672 702 100.0 100.0 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4288730.1 length: 341 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 182-202
ProfileScan PS50157 ZINC_FINGER_C2H2_2 8.808 180-207
264-284
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 7.5e-05 180-199
251-284
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 49 180-202
264-284
no_ID  
Coil coil coiled-coil NA 80-107
HMMPanther PTHR11389 ZINC 3.5e-75 59-316
HMMPanther PTHR11389:SF379AZ2-RELATED T[59-316] 3.5e-75  
HMMPfam PF13894 zf-C2H2_4 0.094 180-199
265-286
Seg seg seg NA 14-47
55-65
80-107
superfamily SSF57667 C2H2 0.00021 246-284
162-206
Wolf-PSORT
Lj1g3v4288730.1	nucl 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4288730.1