Miyakogusa Predicted Gene
- Lj1g3v4277590.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N927_SOYBN |
670 |
78.7 |
86.3 |
(tr|I1N927) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G57570.1 |
416 |
53.0 |
69.9 |
| Symbols: | ARM repeat superfamily protein | chr3:21312598-21320105 FORWARD LENGTH=1092 |
| Medicago |
Medtr7g092130.1 |
635 |
75.4 |
83.8 |
| armadillo/beta-catenin-like repeat protein | HC | chr7:36483045-36501341 | 20130731 |
| Soybean |
Glyma19g32360.1 |
669 |
78.7 |
86.3 |
|
| LJGI |
gnl|LJGI|GO025380 |
1051 |
100.0 |
100.0 |
similar to UniRef100_A2Q3M3 Cluster: Zinc finger, C2H2-type; n=1; Medicago truncatula|Rep: Zinc finger, C2H2-type - Medicago truncatula (Barrel medic), partial (41%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4277590.1 |
length: 432 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
5.9e-06 |
302-428 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
1.2e-06 |
205-431 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
404-416 |
- Wolf-PSORT
Lj1g3v4277590.1 chlo 5, nucl 2, extr 2, E.R. 2, cyto 1, mito 1, plas 1, cysk_nucl 1, E.R._vacu 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4277590.1 |
|