Miyakogusa Predicted Gene

Lj1g3v4276560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A2Q3L7_MEDTR 958 79.2 88.9 (tr|A2Q3L7) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g092100 PE=4 SV=1
TAIR_pep AT5G52630.1 753 64.7 80.4 | Symbols: MEF1 | mitochondrial RNAediting factor 1 | chr5:21350375-21352141 FORWARD LENGTH=588
Medicago Medtr7g092100.1 958 79.2 88.9 | RNAediting factor 1 | HC | chr7:36467361-36465331 | 20130731
Soybean Glyma19g32350.1 913 79.3 87.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4276560.1 length: 598 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.01 90-119
162-188
190-214
264-290
293-321
366-390
HMMPfam PF13812 PPR_3 0.036 329-361
HMMTigr TIGR00756 PPR: 0.0017 90-122
190-215
293-326
366-389
ProfileScan PS51375 PPR 6.895 87-121
157-191
192-223
290-324
259-289
326-356
362-396
428-462
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.9e-05 367-388
no_ID  
HMMPanther PTHR24015 FAMILY 8.8e-304 24-598
HMMPanther PTHR24015:SF130SUBFAMILY NOT 8.8e-304 24-598
HMMPfam PF14432 DYW_deaminase 4.2e-14 471-587
Seg seg seg NA 4-19
438-452
Wolf-PSORT
Lj1g3v4276560.1	chlo 10, nucl 1, plas 1, vacu 1, E.R. 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4276560.1