Miyakogusa Predicted Gene

Lj1g3v4241100.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JNC4_SOYBN 1022 89.1 95.0 (tr|I1JNC4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G41720.1 858 72.3 86.9 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:17403744-17407127 REVERSE LENGTH=822
Medicago Medtr7g091410.1 1021 88.2 95.2 | PPR containing plant-like protein | HC | chr7:36127881-36120598 | 20130731
Soybean Glyma03g29250.1 1021 89.1 95.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4241100.2 length: 560 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 8.1e-13 72-114
142-185
208-255
280-327
350-397
421-469
494-537
HMMTigr TIGR00756 PPR: 1.1e-09 72-105
107-139
142-174
176-210
212-242
248-281
283-317
318-351
353-387
423-456
458-488
494-527
ProfileScan PS51375 PPR 6.478 69-103
104-138
139-173
174-208
209-243
246-280
281-315
316-350
351-385
421-455
386-420
456-490
491-525
526-560
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.3e-07 70-273
320-516
no_ID  
HMMPanther PTHR24015 FAMILY 0 2-542
HMMPanther PTHR24015:SF42 SUBFAMILY 0 2-542
superfamily SSF48452 TPR-like 0.0081 105-276
346-513
Wolf-PSORT
Lj1g3v4241100.2	nucl 5, cyto 5, cyto_nucl 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4241100.2