| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | B9H9T2_POPTR | 2954 | 75.7 | 86.6 | (tr|B9H9T2) ABC transporter family, cholesterol/phospholipid flippase OS=Populus trichocarpa GN=PtrAOH1 PE=3 SV=1 |
| TAIR_pep | AT2G41700.1 | 2704 | 70.1 | 83.4 | | Symbols: ABCA1, AtABCA1 | ATP-binding cassette A1 | chr2:17383239-17396110 REVERSE LENGTH=1882 |
| Medicago | Medtr7g091380.1 | 3395 | 86.8 | 92.4 | | ABC transporter family protein | HC | chr7:36103028-36078789 | 20130731 |
| Soybean | Glyma03g29230.1 | 2602 | 84.6 | 89.9 | |
| LJGI | gnl|LJGI|DC600128 | 714 | 99.7 | 99.7 | similar to UniRef100_Q2V410 Cluster: Uncharacterized protein At2g41700.2; n=1; Arabidopsis thaliana|Rep: Uncharacterized protein At2g41700.2 - Arabidopsis thaliana (Mouse-ear cress), partial (4%) |
| Lj1g3v4241080.1 | length: 1893 aa. | |||
| IPR003439 | ABC transporter-like | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0016887 | ATPase activity | ||
| HMMPfam | PF00005 | ABC_tran | 2.6e-15 | 605-725 1511-1630 |
| ProfileScan | PS50893 | ABC_TRANSPORTER_2 | 18.861 | 562-795 1466-1704 |
| IPR003593 | AAA+ ATPase domain | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Molecular Function | GO:0017111 | nucleoside-triphosphatase activity | ||
| HMMSmart | SM00382 | ATPases | 9.6e-07 | 590-772 1496-1683 |
| IPR017871 | ABC transporter, conserved site | |||
| Molecular Function | GO:0005524 | ATP binding | ||
| Molecular Function | GO:0016887 | ATPase activity | ||
| PatternScan | PS00211 | ABC_TRANSPORTER_1 | NA | 697-711 1603-1617 |
| IPR026082 | ABC transporter A, ABCA | |||
| HMMPanther | PTHR19229 | ATP-BINDING | 0 | 6-1890 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | |||
| superfamily | SSF52540 | P-loop | 1.6e-57 | 564-777 1474-1686 |
| no_ID | ||||
| Gene3D | G3DSA:3.40.50.300 | no description | 5.1e-66 | 558-800 1463-1702 |
| HMMPanther | PTHR19229:SF26 | SUBFAMILY | 0 | 6-1890 |
| HMMPfam | PF12698 | ABC2_membrane_3 | 7e-36 | 215-480 994-1396 |
| Seg | seg | seg | NA | 33-49 1038-1043 |
Lj1g3v4241080.1 plas 6, nucl 3, golg_plas 3, cysk_plas 3, E.R._plas 3, mito_plas 3
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v4241080.1 |