Miyakogusa Predicted Gene
- Lj1g3v4236970.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SNZ6_LOTJA |
384 |
86.9 |
87.8 |
(tr|I3SNZ6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G41600.3 |
187 |
44.8 |
63.3 |
| Symbols: | Mitochondrial glycoprotein family protein | chr2:17345597-17346701 REVERSE LENGTH=207 |
| Medicago |
Medtr7g091050.1 |
283 |
63.2 |
75.3 |
| glycoprotein family protein | HC | chr7:35918096-35913571 | 20130731 |
| Soybean |
Glyma03g29020.1 |
275 |
62.4 |
72.6 |
|
| LJGI |
gnl|LJGI|GO024342 |
973 |
98.7 |
98.7 |
weakly similar to UniRef100_A7PWJ3 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4236970.1 |
length: 239 aa. |
| IPR003428 |
Mitochondrial glycoprotein |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005759 |
mitochondrial matrix |
|
|
| Gene3D |
G3DSA:3.10.280.10 |
no description |
3e-24 |
118-225 |
| HMMPfam |
PF02330 |
MAM33 |
2e-16 |
120-224 |
| superfamily |
SSF54529 |
Mitochondrial |
2e-31 |
14-225 |
| no_ID |
|
| HMMPanther |
PTHR10826 |
COMPLEMENT |
7.9e-19 |
122-227 |
| HMMPanther |
PTHR10826:SF1 |
COMPLEMENT |
7.9e-19 |
122-227 |
- Wolf-PSORT
Lj1g3v4236970.1 nucl 5, plas 3.5, golg_plas 2.5, mito 2, chlo 1, cyto 1, cysk 1, cyto_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4236970.1 |
|