Miyakogusa Predicted Gene

Lj1g3v4170190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S6C0_LOTJA 382 81.2 81.2 (tr|I3S6C0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G57040.1 231 54.9 64.3 | Symbols: ARR9, ATRR4 | response regulator 9 | chr3:21110059-21111228 FORWARD LENGTH=234
Medicago Medtr7g490310.2 291 66.5 71.1 | two-component response regulator ARR3-like protein | HC | chr7:35463772-35459164 | 20130731
Soybean Glyma03g28570.1 299 66.4 69.6  
LJGI gnl|LJGI|TC57251 1342 97.9 97.9 similar to UniRef100_A7QJJ8 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4170190.1 length: 239 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 5.5e-20 12-140
HMMSmart SM00448 cheY-homologous 4e-19 10-143
ProfileScan PS50110 RESPONSE_REGULATORY 27.011 11-147
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 6.3e-27 7-148
no_ID  
Coil coil coiled-coil NA 198-223
Gene3D G3DSA:3.40.50.2300 no description 4.5e-36 8-149
HMMPanther PTHR26402 RESPONSE 3.1e-70 5-220
HMMPanther PTHR26402:SF256TWO-COMPONENT RESPONSE 3.1e-70 5-220
Seg seg seg NA 53-68
169-185
200-211
Wolf-PSORT
Lj1g3v4170190.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4170190.1