Miyakogusa Predicted Gene

Lj1g3v4157100.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JUS8_SOYBN 421 70.1 74.5 (tr|I1JUS8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT4G32750.1 350 60.7 69.2 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15796415-15798091 REVERSE LENGTH=293

Medicago Medtr3g110075.1 416 69.9 75.0 | transmembrane protein, putative | HC | chr3:50962931-50959535 | 20130731

Soybean Glyma04g08580.1 421 70.1 74.5

LJGI gnl|LJGI|TC67154 1760 100.0 100.0 similar to UniRef100_A7P5B0 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4157100.1 length: 294 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 35-53
166-184
264-280

Wolf-PSORT

Lj1g3v4157100.1 cyto 7, chlo 3, E.R. 2, pero 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4157100.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JUS8_SOYBN	421	70.1	74.5	(tr\|I1JUS8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT4G32750.1	350	60.7	69.2	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr4:15796415-15798091 REVERSE LENGTH=293
Medicago	Medtr3g110075.1	416	69.9	75.0	\| transmembrane protein, putative \| HC \| chr3:50962931-50959535 \| 20130731
Soybean	Glyma04g08580.1	421	70.1	74.5
LJGI	gnl\|LJGI\|TC67154	1760	100.0	100.0	similar to UniRef100_A7P5B0 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (81%)

no_ID
Lj1g3v4157100.1				length: 294 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	35-53 166-184 264-280