Miyakogusa Predicted Gene
- Lj1g3v4156050.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A2Q2Y5_MEDTR |
670 |
75.6 |
82.9 |
(tr|A2Q2Y5) Protein WAX2 OS=Medicago truncatula GN=MTR_7g090140 PE=4 SV=1 |
| TAIR_pep |
AT1G02205.1 |
474 |
53.1 |
70.2 |
| Symbols: CER1 | Fatty acid hydroxylase superfamily | chr1:419650-422154 FORWARD LENGTH=461 |
| Medicago |
Medtr7g090140.2 |
671 |
75.6 |
82.9 |
| fatty acid hydroxylase superfamily protein | LC | chr7:35377869-35383357 | 20130731 |
| Soybean |
Glyma03g24460.1 |
488 |
53.5 |
71.1 |
|
| LJGI |
gnl|LJGI|TC65470 |
1209 |
100.0 |
100.0 |
similar to UniRef100_Q2HW67 Cluster: Sterol desaturase; n=2; Medicago truncatula|Rep: Sterol desaturase - Medicago truncatula (Barrel medic), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4156050.1 |
length: 431 aa. |
| IPR021940 |
Uncharacterised domain Wax2, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF12076 |
Wax2_C |
7.8e-71 |
254-416 |
| no_ID |
|
| HMMPanther |
PTHR11863 |
STEROL |
4.3e-87 |
5-261 |
| HMMPanther |
PTHR11863:SF1 |
STEROL |
4.3e-87 |
5-261 |
| Seg |
seg |
seg |
NA |
27-42 |
- Wolf-PSORT
Lj1g3v4156050.1 chlo 5, nucl 3, extr 2, vacu 2, cyto_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4156050.1 |
|