Miyakogusa Predicted Gene

Lj1g3v4140640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KQS0_MEDTR 295 65.3 69.4 (tr|G7KQS0) DNA gyrase subunit B OS=Medicago truncatula GN=MTR_7g089790 PE=3 SV=1
TAIR_pep AT5G04130.1 241 68.0 76.2 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1122084-1128031 REVERSE LENGTH=732
Medicago Medtr7g089790.1 296 65.3 69.4 | DNA gyrase subunit B | HC | chr7:35184228-35173250 | 20130731
Soybean Glyma19g31030.1 285 67.6 74.4  
LJGI gnl|LJGI|TC66174 926 100.0 100.0 similar to UniRef100_Q5YLB4 Cluster: DNA gyrase subunit B, chloroplast/mitochondrial precursor; n=1; Nicotiana benthamiana|Rep: DNA gyrase subunit B, chloroplast/mitochondrial precursor - Nicotiana benthamiana, partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4140640.1 length: 273 aa.
IPR001241 DNA topoisomerase, type IIA
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006265 DNA topological change    
FPrintScan PR00418 TPI2FAMILY 4.5e-21 124-139
159-172
204-218
HMMSmart SM00433 TopoisomeraseII 0.0086 124-273
IPR003594 Histidine kinase-like ATPase, ATP-binding domain
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.565.10 no description 1.8e-64 95-242
HMMPfam PF02518 HATPase_c 7.8e-17 122-231
HMMSmart SM00387 Histidine 1.5e-25 120-264
superfamily SSF55874 ATPase 4.8e-52 94-266
no_ID  
HMMPanther PTHR10169 DNA 8.7e-82 73-241
HMMPanther PTHR10169:SF20 DNA 8.7e-82 73-241
Seg seg seg NA 5-13
27-55
198-214
Wolf-PSORT
Lj1g3v4140640.1	chlo 7.5, chlo_mito 7, mito 5.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4140640.1