Miyakogusa Predicted Gene

Lj1g3v4140620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N8R7_SOYBN 780 62.6 74.8 (tr|I1N8R7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G80270.3 625 61.9 80.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | chr1:30181265-30183331 FORWARD LENGTH=596
Medicago Medtr7g089770.1 766 62.8 75.2 | DNA-binding protein | HC | chr7:35161437-35164842 | 20130731
Soybean Glyma19g31020.1 780 62.6 74.8  
LJGI gnl|LJGI|TC70664 1326 99.9 99.9 weakly similar to UniRef100_Q9MQV2 Cluster: DNA-binding protein; n=1; Triticum aestivum|Rep: DNA-binding protein - Triticum aestivum (Wheat), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4140620.1 length: 610 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.84 242-270
351-375
450-477
483-506
HMMPfam PF13812 PPR_3 0.051 311-342
525-550
HMMTigr TIGR00756 PPR: 3.4e-05 242-274
ProfileScan PS51375 PPR 8.089 240-274
309-343
344-378
445-479
480-514
519-553
no_ID  
HMMPanther PTHR24015 FAMILY 2.1e-249 65-598
HMMPanther PTHR24015:SF26 PREDICTED: 2.1e-249 65-598
Seg seg seg NA 80-91
96-111
Wolf-PSORT
Lj1g3v4140620.1	mito 8, cyto_mito 5.5, chlo 3, nucl 1, cysk 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4140620.1