Miyakogusa Predicted Gene
- Lj1g3v4139600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T9H9_LOTJA |
304 |
83.2 |
87.0 |
(tr|I3T9H9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G39960.1 |
251 |
68.3 |
78.1 |
| Symbols: | Microsomal signal peptidase 25 kDa subunit (SPC25) | chr2:16681666-16683491 REVERSE LENGTH=192 |
| Medicago |
Medtr5g081900.1 |
266 |
70.9 |
79.4 |
| microsomal signal peptidase 25 kDa subunit | HC | chr5:35130564-35127667 | 20130731 |
| Soybean |
Glyma14g06720.1 |
301 |
81.5 |
85.9 |
|
| LJGI |
gnl|LJGI|TC78337 |
1074 |
99.8 |
99.8 |
weakly similar to UniRef100_Q6NQE4 Cluster: At4g04200; n=1; Arabidopsis thaliana|Rep: At4g04200 - Arabidopsis thaliana (Mouse-ear cress), partial (90%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4139600.1 |
length: 181 aa. |
| IPR009582 |
Signal peptidase complex subunit 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005787 |
signal peptidase complex |
|
|
| Biological Process |
GO:0006465 |
signal peptide processing |
|
|
| Molecular Function |
GO:0008233 |
peptidase activity |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPfam |
PF06703 |
SPC25 |
4.9e-45 |
17-172 |
| no_ID |
|
| HMMPanther |
PTHR13085 |
MICROSOMAL |
7.3e-79 |
1-181 |
| HMMPanther |
PTHR13085:SF0 |
SUBFAMILY |
7.3e-79 |
1-181 |
| Seg |
seg |
seg |
NA |
45-56 |
- Wolf-PSORT
Lj1g3v4139600.1 nucl 4.5, cyto_nucl 4, cyto 2.5, mito 2, plas 2, E.R. 2, E.R._plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4139600.1 |
|