Miyakogusa Predicted Gene

Lj1g3v4139550.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M571_SOYBN 831 80.2 85.4 (tr|K7M571) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G39940.1 677 67.3 77.1 | Symbols: COI1 | RNI-like superfamily protein | chr2:16672848-16675486 REVERSE LENGTH=592
Medicago Medtr5g081870.1 808 77.2 84.0 | coronatine-insensitive protein | HC | chr5:35098564-35093692 | 20130731
Soybean Glyma02g42150.1 825 79.9 85.5  
LJGI gnl|LJGI|TC81898 1364 99.7 99.7 similar to UniRef100_Q45FY8 Cluster: Coronatine-insensitive 1; n=1; Glycine max|Rep: Coronatine-insensitive 1 - Glycine max (Soybean), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4139550.2 length: 516 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 8.4 33-57
59-84
236-259
296-320
354-380
406-431
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3e-29 232-419
HMMPanther PTHR23125 F-BOX/LEUCINE 3.6e-245 2-481
HMMPanther PTHR23125:SF94 SUBFAMILY 3.6e-245 2-481
Seg seg seg NA 210-225
258-267
269-282
superfamily SSF52047 RNI-like 3.7e-28 24-493
Wolf-PSORT
Lj1g3v4139550.2	chlo 5, cyto 4, nucl 3, plas 1, pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4139550.2