Miyakogusa Predicted Gene

Lj1g3v4117200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LR55_SOYBN 1308 75.8 83.0 (tr|K7LR55) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G30470.1 648 48.6 60.9 | Symbols: HSI2, VAL1 | high-level expression of sugar-inducible gene 2 | chr2:12980904-12984724 REVERSE LENGTH=790
Medicago Medtr3g467380.1 1248 72.0 80.3 | AP2/B3 transcription factor family protein | HC | chr3:27798642-27790784 | 20130731
Soybean Glyma18g05840.1 1214 72.4 80.2  
LJGI gnl|LJGI|TC80498 2625 99.6 99.6 similar to UniRef100_Q6Z3U3 Cluster: VP1/ABI3 family regulatory protein-like; n=1; Oryza sativa Japonica Group|Rep: VP1/ABI3 family regulatory protein-like - Oryza sativa subsp. japonica (Rice), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4117200.1 length: 853 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1e-17 274-374
HMMSmart SM01019 B3 5.4e-22 274-375
ProfileScan PS50863 B3 10.278 274-375
IPR011124 Zinc finger, CW-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF07496 zf-CW 1.9e-11 543-586
ProfileScan PS51050 ZF_CW 14.296 538-588
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 3.2e-28 270-379
superfamily SSF101936 DNA-binding 2e-20 268-382
no_ID  
HMMPanther PTHR23336 ZINC 1.1e-89 222-737
HMMPanther PTHR23336:SF2 SUBFAMILY 1.1e-89 222-737
Seg seg seg NA 699-708
Wolf-PSORT
Lj1g3v4117200.1	nucl 12, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4117200.1