Miyakogusa Predicted Gene

Lj1g3v4107150.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KQP7_MEDTR 535 88.0 94.9 (tr|G7KQP7) Ubiquitin-associated domain-containing protein OS=Medicago truncatula GN=MTR_7g089550 PE=4 SV=1
TAIR_pep AT3G56740.1 426 74.8 85.4 | Symbols: | Ubiquitin-associated (UBA) protein | chr3:21015631-21017883 FORWARD LENGTH=293
Medicago Medtr7g089550.1 535 88.0 94.9 | ubiquitin-associated/TS-N domain protein | HC | chr7:35067788-35061299 | 20130731
Soybean Glyma03g28200.1 509 88.7 94.5  
LJGI gnl|LJGI|TC69843 1748 100.0 100.0 similar to UniRef100_Q2HSZ5 Cluster: UBA-like; n=1; Medicago truncatula|Rep: UBA-like - Medicago truncatula (Barrel medic), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4107150.1 length: 293 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00627 UBA 2.8e-09 252-287
IPR009060 UBA-like
Molecular Function GO:0005515 protein binding    
superfamily SSF46934 UBA-like 1.3e-12 224-289
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
HMMSmart SM00165 Ubiquitin 2.2e-10 252-289
ProfileScan PS50030 UBA 14.740 250-290
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 0.00015 14-169
no_ID  
Gene3D G3DSA:1.10.8.10 no description 7.8e-11 246-290
HMMPanther PTHR13681 FAMILY 1.6e-35 6-293
superfamily SSF144091 Rhomboid-like 2e-14 7-199
Wolf-PSORT
Lj1g3v4107150.1	chlo 5, plas 5, vacu 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4107150.1