| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1N8Q6_SOYBN | 731 | 83.2 | 88.6 | (tr|I1N8Q6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G05055.1 | 619 | 74.2 | 83.2 | | Symbols: ATGTF2H2, GTF2H2 | general transcription factor II H2 | chr1:1448913-1450852 REVERSE LENGTH=421 |
| Medicago | Medtr7g089440.4 | 726 | 83.1 | 86.4 | | general transcription factor IIH subunit 2 | HC | chr7:35013294-35008143 | 20130731 |
| Soybean | Glyma19g30920.1 | 731 | 83.2 | 88.6 | |
| LJGI | gnl|LJGI|TC58589 | 1197 | 100.0 | 100.0 | similar to UniRef100_A7NZG2 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
| Lj1g3v4107020.1 | length: 422 aa. | |||
| IPR002035 | von Willebrand factor, type A | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMSmart | SM00327 | von | 2.6e-13 | 84-260 |
| ProfileScan | PS50234 | VWFA | 9.161 | 86-225 |
| IPR004595 | TFIIH C1-like domain | |||
| Biological Process | GO:0006281 | DNA repair | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF07975 | C1_4 | 7.8e-19 | 363-411 |
| HMMSmart | SM01047 | TFIIH | 5.9e-21 | 363-411 |
| IPR007087 | Zinc finger, C2H2 | |||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| PatternScan | PS00028 | ZINC_FINGER_C2H2_1 | NA | 384-404 |
| IPR007198 | Ssl1-like | |||
| HMMPfam | PF04056 | Ssl1 | 3.3e-84 | 90-280 |
| IPR012170 | TFIIH subunit Ssl1/p44 | |||
| Cellular Component | GO:0000439 | core TFIIH complex | ||
| Biological Process | GO:0006289 | nucleotide-excision repair | ||
| Biological Process | GO:0006351 | transcription, DNA-dependent | ||
| HMMPIR | PIRSF015919 | TFIIH | 4.1e-229 | 1-412 |
| HMMPanther | PTHR12695 | GENERAL | 1.9e-190 | 1-422 |
| HMMTigr | TIGR00622 | ssl1: | 2.4e-36 | 302-411 |
| no_ID | ||||
| Gene3D | G3DSA:3.10.370.10 | no description | 1.6e-17 | 358-410 |
| HMMPanther | PTHR12695:SF2 | GENERAL | 1.9e-190 | 1-422 |
| Seg | seg | seg | NA | 9-28 64-78 |
| superfamily | SSF53300 | vWA-like | 1.2e-17 | 79-251 |
| superfamily | SSF57889 | Cysteine-rich | 2e-14 | 347-410 |
Lj1g3v4107020.1 nucl 8.5, cyto_nucl 5.5, chlo 2, cyto 1.5, chlo_mito 1.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v4107020.1 |