Miyakogusa Predicted Gene

Lj1g3v4104820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LDI8_SOYBN 1448 77.8 86.2 (tr|I1LDI8) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT3G59140.1 999 57.4 72.9 | Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453
Medicago Medtr1g099280.4 1430 78.4 86.5 | ABC transporter-like family-protein | HC | chr1:44809031-44816334 | 20130731
Soybean Glyma10g37160.1 1432 78.7 87.0  
LJGI gnl|LJGI|FS339047 161 89.0 89.0 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined scaffold_171, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_171, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4104820.1 length: 903 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 2.2e-30 308-554
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 2.1e-14 665-775
ProfileScan PS50893 ABC_TRANSPORTER_2 22.022 625-846
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.2e-15 650-823
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 5.6e-35 252-603
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 748-762
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 30.645 309-588
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-48 623-832
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 6.7e-22 296-604
Gene3D G3DSA:3.40.50.300 no description 1.8e-64 626-851
HMMPanther PTHR24223 FAMILY 0 33-903
HMMPanther PTHR24223:SF107SUBFAMILY NOT 0 33-903
Seg seg seg NA 40-51
Wolf-PSORT
Lj1g3v4104820.1	plas 8, nucl 3, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4104820.1