Miyakogusa Predicted Gene
- Lj1g3v4103630.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7KJ84_SOYBN |
801 |
93.6 |
96.6 |
(tr|K7KJ84) Queuine tRNA-ribosyltransferase OS=Glycine max PE=3 SV=1 |
TAIR_pep |
--No_Hits--
|
|
|
|
|
Medicago |
Medtr5g099370.1 |
781 |
91.2 |
95.8 |
| queuine tRNA-ribosyltransferase | HC | chr5:43571527-43578673 | 20130731 |
Soybean |
Glyma06g10550.1 |
516 |
89.4 |
91.9 |
|
LJGI |
gnl|LJGI|FS329226 |
1066 |
100.0 |
100.0 |
homologue to UniRef100_Q6K4A3 Cluster: Queuine tRNA-ribosyltransferase; n=1; Oryza sativa Japonica Group|Rep: Queuine tRNA-ribosyltransferase - Oryza sativa subsp. japonica (Rice), partial (52%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4103630.1 |
length: 464 aa. |
IPR002616 |
tRNA-guanine(15) transglycosylase-like |
method |
AccNumber |
shortName |
E-value |
location |
Biological Process |
GO:0006400 |
tRNA modification |
|
|
Molecular Function |
GO:0008479 |
queuine tRNA-ribosyltransferase activity |
|
|
Biological Process |
GO:0008616 |
queuosine biosynthetic process |
|
|
Gene3D |
G3DSA:3.20.20.105 |
no description |
4.3e-165 |
55-424 |
HMMPanther |
PTHR11962 |
QUEUINE |
4.4e-175 |
53-442 |
HMMPfam |
PF01702 |
TGT |
2.2e-89 |
184-420 |
HMMTigr |
TIGR00449 |
tgt_general: |
2e-129 |
62-422 |
superfamily |
SSF51713 |
tRNA-guanine |
6.4e-141 |
57-423 |
IPR004803 |
Queuine tRNA-ribosyltransferase |
Biological Process |
GO:0008033 |
tRNA processing |
|
|
Molecular Function |
GO:0008479 |
queuine tRNA-ribosyltransferase activity |
|
|
Biological Process |
GO:0008616 |
queuosine biosynthetic process |
|
|
HAMAP |
MF_00168 |
Q_tRNA_Tgt |
46.410 |
60-416 |
HMMTigr |
TIGR00430 |
Q_tRNA_tgt: |
6.2e-133 |
62-422 |
no_ID |
|
HMMPanther |
PTHR11962:SF0 |
SUBFAMILY |
4.4e-175 |
53-442 |
- Wolf-PSORT
Lj1g3v4103630.1 chlo 9.5, chlo_mito 6.33333, mito 2, cyto_mito 1.83333
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj1g3v4103630.1 |
|